biology/py-biopython - The NetBSD Packages Collection

Python libraries for computational molecular biology

The Biopython package contains high-quality, reusable modules and
scripts written in Python to make it as easy as possible to use Python
for bioinformatics.  The Biopython includes the follwing: the ability
to parse bioinformatics files into python utilizable data structures,
including support for the formats such as Blast output, Clustalw,
FASTA, GenBank, PubMed and Medicine, various Expasy files, SCOP,
Rebase, UniGene, and SwissProt.

Build dependencies

pkgtools/cwrappers

Runtime dependencies

devel/py-setuptools lang/python38 lang/python38 math/py-numpy math/py-numpy

Binary packages

OSArchitectureVersion
NetBSD 8.0i386py27-biopython-1.74.tgz
NetBSD 8.0i386py36-biopython-1.74.tgz
NetBSD 8.0i386py37-biopython-1.74.tgz
NetBSD 8.0i386py38-biopython-1.74.tgz
NetBSD 8.0i386py27-biopython-1.74nb1.tgz
NetBSD 8.0i386py36-biopython-1.74nb1.tgz
NetBSD 8.0i386py37-biopython-1.74nb1.tgz
NetBSD 8.0i386py38-biopython-1.74nb1.tgz
NetBSD 8.0i386py39-biopython-1.74nb1.tgz
NetBSD 8.0i386py27-biopython-1.74nb1.tgz
NetBSD 8.0i386py36-biopython-1.74nb1.tgz
NetBSD 8.0i386py37-biopython-1.74nb1.tgz
NetBSD 8.0i386py38-biopython-1.74nb1.tgz
NetBSD 8.0i386py39-biopython-1.74nb1.tgz
NetBSD 8.0powerpcpy27-biopython-1.74.tgz
NetBSD 8.0powerpcpy36-biopython-1.74.tgz
NetBSD 8.0powerpcpy37-biopython-1.74.tgz
NetBSD 8.0powerpcpy38-biopython-1.74.tgz
NetBSD 8.0powerpcpy27-biopython-1.74nb1.tgz
NetBSD 8.0powerpcpy36-biopython-1.74nb1.tgz
NetBSD 8.0powerpcpy37-biopython-1.74nb1.tgz
NetBSD 8.0powerpcpy38-biopython-1.74nb1.tgz
NetBSD 8.0powerpcpy39-biopython-1.74nb1.tgz
NetBSD 8.0powerpcpy27-biopython-1.74nb1.tgz
NetBSD 8.0powerpcpy36-biopython-1.74nb1.tgz
NetBSD 8.0powerpcpy37-biopython-1.74nb1.tgz
NetBSD 8.0powerpcpy38-biopython-1.74nb1.tgz
NetBSD 8.0powerpcpy39-biopython-1.74nb1.tgz
NetBSD 8.0x86_64py27-biopython-1.74nb1.tgz
NetBSD 8.0x86_64py36-biopython-1.74nb1.tgz
NetBSD 8.0x86_64py37-biopython-1.74nb1.tgz
NetBSD 8.0x86_64py38-biopython-1.74nb1.tgz
NetBSD 8.0x86_64py39-biopython-1.74nb1.tgz
NetBSD 8.0x86_64py27-biopython-1.74.tgz
NetBSD 8.0x86_64py36-biopython-1.74.tgz
NetBSD 8.0x86_64py37-biopython-1.74.tgz
NetBSD 8.0x86_64py38-biopython-1.74.tgz
NetBSD 8.0x86_64py27-biopython-1.74nb1.tgz
NetBSD 8.0x86_64py36-biopython-1.74nb1.tgz
NetBSD 8.0x86_64py37-biopython-1.74nb1.tgz
NetBSD 8.0x86_64py38-biopython-1.74nb1.tgz
NetBSD 8.0x86_64py39-biopython-1.74nb1.tgz
NetBSD 9.0aarch64py27-biopython-1.74nb1.tgz
NetBSD 9.0aarch64py36-biopython-1.74nb1.tgz
NetBSD 9.0aarch64py37-biopython-1.74nb1.tgz
NetBSD 9.0aarch64py38-biopython-1.74nb1.tgz
NetBSD 9.0aarch64py39-biopython-1.74nb1.tgz
NetBSD 9.0aarch64py27-biopython-1.74.tgz
NetBSD 9.0aarch64py36-biopython-1.74.tgz
NetBSD 9.0aarch64py37-biopython-1.74.tgz
NetBSD 9.0aarch64py38-biopython-1.74.tgz
NetBSD 9.0aarch64py27-biopython-1.74nb1.tgz
NetBSD 9.0aarch64py36-biopython-1.74nb1.tgz
NetBSD 9.0aarch64py37-biopython-1.74nb1.tgz
NetBSD 9.0aarch64py38-biopython-1.74nb1.tgz
NetBSD 9.0aarch64py39-biopython-1.74nb1.tgz
NetBSD 9.0alphapy27-biopython-1.74nb1.tgz
NetBSD 9.0alphapy36-biopython-1.74nb1.tgz
NetBSD 9.0alphapy37-biopython-1.74nb1.tgz
NetBSD 9.0alphapy38-biopython-1.74nb1.tgz
NetBSD 9.0alphapy39-biopython-1.74nb1.tgz
NetBSD 9.0alphapy27-biopython-1.74.tgz
NetBSD 9.0alphapy36-biopython-1.74.tgz
NetBSD 9.0alphapy37-biopython-1.74.tgz
NetBSD 9.0alphapy38-biopython-1.74.tgz
NetBSD 9.0alphapy27-biopython-1.74nb1.tgz
NetBSD 9.0alphapy36-biopython-1.74nb1.tgz
NetBSD 9.0alphapy37-biopython-1.74nb1.tgz
NetBSD 9.0alphapy38-biopython-1.74nb1.tgz
NetBSD 9.0alphapy39-biopython-1.74nb1.tgz
NetBSD 9.0i386py27-biopython-1.74.tgz
NetBSD 9.0i386py36-biopython-1.74.tgz
NetBSD 9.0i386py37-biopython-1.74.tgz
NetBSD 9.0i386py38-biopython-1.74.tgz
NetBSD 9.0i386py27-biopython-1.74nb1.tgz
NetBSD 9.0i386py36-biopython-1.74nb1.tgz
NetBSD 9.0i386py37-biopython-1.74nb1.tgz
NetBSD 9.0i386py38-biopython-1.74nb1.tgz
NetBSD 9.0i386py39-biopython-1.74nb1.tgz
NetBSD 9.0i386py27-biopython-1.74nb1.tgz
NetBSD 9.0i386py36-biopython-1.74nb1.tgz
NetBSD 9.0i386py37-biopython-1.74nb1.tgz
NetBSD 9.0i386py38-biopython-1.74nb1.tgz
NetBSD 9.0i386py39-biopython-1.74nb1.tgz
NetBSD 9.0powerpcpy27-biopython-1.74nb1.tgz
NetBSD 9.0powerpcpy36-biopython-1.74nb1.tgz
NetBSD 9.0powerpcpy37-biopython-1.74nb1.tgz
NetBSD 9.0powerpcpy38-biopython-1.74nb1.tgz
NetBSD 9.0powerpcpy39-biopython-1.74nb1.tgz
NetBSD 9.0powerpcpy27-biopython-1.74.tgz
NetBSD 9.0powerpcpy36-biopython-1.74.tgz
NetBSD 9.0powerpcpy37-biopython-1.74.tgz
NetBSD 9.0powerpcpy38-biopython-1.74.tgz
NetBSD 9.0sparc64py36-biopython-1.74nb1.tgz
NetBSD 9.0sparc64py37-biopython-1.74nb1.tgz
NetBSD 9.0sparc64py38-biopython-1.74nb1.tgz
NetBSD 9.0sparc64py39-biopython-1.74nb1.tgz
NetBSD 9.0x86_64py27-biopython-1.74nb1.tgz
NetBSD 9.0x86_64py36-biopython-1.74nb1.tgz
NetBSD 9.0x86_64py37-biopython-1.74nb1.tgz
NetBSD 9.0x86_64py38-biopython-1.74nb1.tgz
NetBSD 9.0x86_64py39-biopython-1.74nb1.tgz
NetBSD 9.0x86_64py27-biopython-1.74nb1.tgz
NetBSD 9.0x86_64py36-biopython-1.74nb1.tgz
NetBSD 9.0x86_64py37-biopython-1.74nb1.tgz
NetBSD 9.0x86_64py38-biopython-1.74nb1.tgz
NetBSD 9.0x86_64py39-biopython-1.74nb1.tgz
NetBSD 9.0x86_64py27-biopython-1.74nb1.tgz
NetBSD 9.0x86_64py36-biopython-1.74nb1.tgz
NetBSD 9.0x86_64py37-biopython-1.74nb1.tgz
NetBSD 9.0x86_64py38-biopython-1.74nb1.tgz
NetBSD 9.0x86_64py39-biopython-1.74nb1.tgz
NetBSD 9.0x86_64py27-biopython-1.74nb1.tgz
NetBSD 9.0x86_64py36-biopython-1.74nb1.tgz
NetBSD 9.0x86_64py37-biopython-1.74nb1.tgz
NetBSD 9.0x86_64py38-biopython-1.74nb1.tgz
NetBSD 9.0x86_64py39-biopython-1.74nb1.tgz
NetBSD 9.0x86_64py27-biopython-1.74.tgz
NetBSD 9.0x86_64py36-biopython-1.74.tgz
NetBSD 9.0x86_64py37-biopython-1.74.tgz
NetBSD 9.0x86_64py38-biopython-1.74.tgz
NetBSD 9.0x86_64py27-biopython-1.74nb1.tgz
NetBSD 9.0x86_64py36-biopython-1.74nb1.tgz
NetBSD 9.0x86_64py37-biopython-1.74nb1.tgz
NetBSD 9.0x86_64py38-biopython-1.74nb1.tgz
NetBSD 9.0x86_64py39-biopython-1.74nb1.tgz
NetBSD 9.0x86_64py27-biopython-1.74nb1.tgz
NetBSD 9.0x86_64py36-biopython-1.74nb1.tgz
NetBSD 9.0x86_64py37-biopython-1.74nb1.tgz
NetBSD 9.0x86_64py38-biopython-1.74nb1.tgz
NetBSD 9.0x86_64py39-biopython-1.74nb1.tgz

Binary packages can be installed with the high-level tool pkgin (which can be installed with pkg_add) or pkg_add(1) (installed by default). The NetBSD packages collection is also designed to permit easy installation from source.

Available build options

(none)

Known vulnerabilities

The pkg_admin audit command locates any installed package which has been mentioned in security advisories as having vulnerabilities.

Please note the vulnerabilities database might not be fully accurate, and not every bug is exploitable with every configuration.


Problem reports, updates or suggestions for this package should be reported with send-pr.