$NetBSD: patch-aa,v 1.3 2013/04/01 08:00:16 sbd Exp $

Allow flags to contain commas.

--- share/template/Makefile.in.orig	2011-09-21 12:38:30.000000000 +0000
+++ share/template/Makefile.in
@@ -250,11 +250,11 @@ XLIBS = -lmd@LIBSUFFIX@ -lgmx@LIBSUFFIX@
 XCC = @CC@
 @GMX_DOUBLE_FALSE@MYCFLAGS = @CFLAGS@ @INCLUDES@ -I@includedir@
 @GMX_DOUBLE_TRUE@MYCFLAGS = @CFLAGS@ @INCLUDES@ -I@includedir@ -DGMX_DOUBLE
-@GMX_DOUBLE_FALSE@template_DATA = template.c README Makefile.@host@ Makefile.pkg
-@GMX_DOUBLE_TRUE@template_DATA = template.c README Makefile.@host@_double Makefile.pkg
+@GMX_DOUBLE_FALSE@template_DATA = template.c README Makefile.@host_alias@ Makefile.pkg
+@GMX_DOUBLE_TRUE@template_DATA = template.c README Makefile.@host_alias@_double Makefile.pkg
 EXTRA_DIST = template.c README Template.mak Makefile.pkg CMakeLists.txt.template
 BUILT_SOURCES = gromacs
-CLEANFILES = Makefile.@host@ Makefile.@host@_double *~ \\\#*
+CLEANFILES = Makefile.@host_alias@ Makefile.@host_alias@_double *~ \\\#*
 template_SOURCES = template.c
 LDADD = ../../src/mdlib/libmd@LIBSUFFIX@.la ../../src/gmxlib/libgmx@LIBSUFFIX@.la
 all: $(BUILT_SOURCES)
@@ -569,13 +569,13 @@ uninstall-am: uninstall-templateDATA
 gromacs:
 	$(LN_S) $(top_srcdir)/include gromacs
 
-Makefile.@host@ Makefile.@host@_double: Template.mak Makefile 
+Makefile.@host_alias@ Makefile.@host_alias@_double: Template.mak Makefile 
 	cat $(srcdir)/Template.mak | \
-	sed 's,@LDFLAGS\@,$(XLDFLAGS),' | \
-	sed 's,@LIBS\@,$(XLIBS),' | \
-	sed 's,@CFLAGS\@,$(MYCFLAGS),' | \
+	sed 's|@LDFLAGS\@|$(XLDFLAGS)|' | \
+	sed 's|@LIBS\@|$(XLIBS)|' | \
+	sed 's|@CFLAGS\@|$(MYCFLAGS)|' | \
 	sed 's,@CC\@,$(XCC),' | \
-	sed 's,@host\@,@host@,' >$@
+	sed 's,@host\@,@host_alias@,' >$@
 #template.$(OBJEXT): gromacs
 
 clean-local: